3D structure

PDB id
4V5G (explore in PDB, NAKB, or RNA 3D Hub)
Description
The crystal structure of the 70S ribosome bound to EF-Tu and tRNA
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
GGUUCC*GGGUUAGGCGGGACCUAAG*CGAAGGGCAGCC*GGCCCU*ACCCGUAC
Length
51 nucleotides
Bulged bases
4V5G|1|BA|U|1341, 4V5G|1|BA|A|1379, 4V5G|1|BA|A|1384
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V5G|1|BA|G|1310
4V5G|1|BA|G|1311
4V5G|1|BA|U|1312
4V5G|1|BA|U|1313
4V5G|1|BA|C|1314
4V5G|1|BA|C|1315
*
4V5G|1|BA|G|1337
4V5G|1|BA|G|1338
4V5G|1|BA|G|1339
4V5G|1|BA|U|1340
4V5G|1|BA|U|1341
4V5G|1|BA|A|1342
4V5G|1|BA|G|1343
4V5G|1|BA|G|1344
4V5G|1|BA|C|1345
4V5G|1|BA|G|1346
4V5G|1|BA|G|1347
4V5G|1|BA|G|1348
4V5G|1|BA|A|1349
4V5G|1|BA|C|1350
4V5G|1|BA|C|1351
4V5G|1|BA|U|1352
4V5G|1|BA|A|1353
4V5G|1|BA|A|1354
4V5G|1|BA|G|1355
*
4V5G|1|BA|C|1376
4V5G|1|BA|G|1377
4V5G|1|BA|A|1378
4V5G|1|BA|A|1379
4V5G|1|BA|G|1380
4V5G|1|BA|G|1381
4V5G|1|BA|G|1382
4V5G|1|BA|C|1383
4V5G|1|BA|A|1384
4V5G|1|BA|G|1385
4V5G|1|BA|C|1386
4V5G|1|BA|C|1387
*
4V5G|1|BA|G|1400
4V5G|1|BA|G|1401
4V5G|1|BA|C|1402
4V5G|1|BA|C|1403
4V5G|1|BA|C|1404
4V5G|1|BA|U|1405
*
4V5G|1|BA|A|1597
4V5G|1|BA|C|1598
4V5G|1|BA|C|1599
4V5G|1|BA|C|1600
4V5G|1|BA|G|1601
4V5G|1|BA|U|1602
4V5G|1|BA|A|1603
4V5G|1|BA|C|1604

Current chains

Chain BA
23S RIBOSOMAL RNA

Nearby chains

Chain B7
50S RIBOSOMAL PROTEIN L34
Chain BD
50S RIBOSOMAL PROTEIN L2
Chain BX
50S RIBOSOMAL PROTEIN L23

Coloring options:

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