J5_4V67_002

3D structure

PDB id

4V67 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a translation termination complex formed with release factor RF2.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CAAG*CGGACGGG*CAGGG*CCCAC*GGCAG

Length

27 nucleotides

Bulged bases

4V67|1|AA|A|109, 4V67|1|AA|C|352

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V67|1|AA|C|58
4V67|1|AA|A|59
4V67|1|AA|A|60
4V67|1|AA|G|61
*
4V67|1|AA|C|106
4V67|1|AA|G|107
4V67|1|AA|G|108
4V67|1|AA|A|109
4V67|1|AA|C|110
4V67|1|AA|G|111
4V67|1|AA|G|112
4V67|1|AA|G|113
*
4V67|1|AA|C|314
4V67|1|AA|A|315
4V67|1|AA|G|316
4V67|1|AA|G|317
4V67|1|AA|G|318
*
4V67|1|AA|C|335
4V67|1|AA|C|336
4V67|1|AA|C|337
4V67|1|AA|A|338
4V67|1|AA|C|339
*
4V67|1|AA|G|350
4V67|1|AA|G|351
4V67|1|AA|C|352
4V67|1|AA|A|353
4V67|1|AA|G|354

Current chains

Chain AA

16S RRNA

Nearby chains

Chain AP

30S ribosomal protein S16

Chain AT

30S ribosomal protein S20

Chain BO

50S ribosomal protein L14