J5_4V6E_003

3D structure

PDB id

4V6E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting

Experimental method

X-RAY DIFFRACTION

Resolution

3.71 Å

Loop

Sequence

GCAAG*CGGACGGG*CAC*GAC*GGCAGC

Length

25 nucleotides

Bulged bases

4V6E|1|AA|A|109

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6E|1|AA|G|57
4V6E|1|AA|C|58
4V6E|1|AA|A|59
4V6E|1|AA|A|60
4V6E|1|AA|G|61
*
4V6E|1|AA|C|106
4V6E|1|AA|G|107
4V6E|1|AA|G|108
4V6E|1|AA|A|109
4V6E|1|AA|C|110
4V6E|1|AA|G|111
4V6E|1|AA|G|112
4V6E|1|AA|G|113
*
4V6E|1|AA|C|314
4V6E|1|AA|A|315
4V6E|1|AA|C|316
*
4V6E|1|AA|G|337
4V6E|1|AA|A|338
4V6E|1|AA|C|339
*
4V6E|1|AA|G|350
4V6E|1|AA|G|351
4V6E|1|AA|C|352
4V6E|1|AA|A|353
4V6E|1|AA|G|354
4V6E|1|AA|C|355

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AP

30S ribosomal protein S16

Chain AT

30S ribosomal protein S20

Chain BK

50S ribosomal protein L14

Chain BP

50S ribosomal protein L19