J5_4V6F_005

3D structure

PDB id

4V6F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation complex of the 70S ribosome with three tRNAs and mRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGAG*CGUAG*CGAG*CGCAAAC*GAAAAG

Length

26 nucleotides

Bulged bases

4V6F|1|AA|A|654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6F|1|AA|C|601
4V6F|1|AA|G|602
4V6F|1|AA|A|603
4V6F|1|AA|G|604
*
4V6F|1|AA|C|624
4V6F|1|AA|G|625
4V6F|1|AA|U|626
4V6F|1|AA|A|627
4V6F|1|AA|G|628
*
4V6F|1|AA|C|635
4V6F|1|AA|G|636
4V6F|1|AA|A|637
4V6F|1|AA|G|638
*
4V6F|1|AA|C|650
4V6F|1|AA|G|651
4V6F|1|AA|C|652
4V6F|1|AA|A|653
4V6F|1|AA|A|654
4V6F|1|AA|A|654|||A
4V6F|1|AA|C|654|||B
*
4V6F|1|AA|G|654|||S
4V6F|1|AA|A|654|||T
4V6F|1|AA|A|654|||U
4V6F|1|AA|A|654|||V
4V6F|1|AA|A|655
4V6F|1|AA|G|656

Current chains

Chain AA

23S RIBOSOMAL RNA

Nearby chains

Chain A8

50S RIBOSOMAL PROTEIN L35

Chain AF

50S RIBOSOMAL PROTEIN L4

Chain AO

50S RIBOSOMAL PROTEIN L15