3D structure

PDB id
4V7S (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the E. coli ribosome bound to telithromycin.
Experimental method
X-RAY DIFFRACTION
Resolution
3.25 Å

Loop

Sequence
CGAUGAAG*CGAAUG*CA*UAU*AGG
Length
22 nucleotides
Bulged bases
4V7S|1|BA|U|50
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J5_4V7S_004 not in the Motif Atlas
Homologous match to J5_5J7L_013
Geometric discrepancy: 0.0483
The information below is about J5_5J7L_013
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J5_01737.2
Basepair signature
cWW-F-cWW-F-cWW-tSH-tHH-tHS-cWW-cWW-cWW-F
Number of instances in this motif group
5

Unit IDs

4V7S|1|BA|C|47
4V7S|1|BA|G|48
4V7S|1|BA|A|49
4V7S|1|BA|U|50
4V7S|1|BA|G|51
4V7S|1|BA|A|52
4V7S|1|BA|A|53
4V7S|1|BA|G|54
*
4V7S|1|BA|C|116
4V7S|1|BA|G|117
4V7S|1|BA|A|118
4V7S|1|BA|A|119
4V7S|1|BA|U|120
4V7S|1|BA|G|121
*
4V7S|1|BA|C|130
4V7S|1|BA|A|131
*
4V7S|1|BA|U|148
4V7S|1|BA|A|149
4V7S|1|BA|U|150
*
4V7S|1|BA|A|176
4V7S|1|BA|G|177
4V7S|1|BA|G|178

Current chains

Chain BA
23S rRNA

Nearby chains

Chain B2
50S ribosomal protein L34

Coloring options:


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