J5_4V7U_013

3D structure

PDB id

4V7U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to erythromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGAUGAAGG*CCGAAUGG*CCA*UAU*AGG

Length

26 nucleotides

Bulged bases

4V7U|1|DA|U|50

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7U|1|DA|C|47
4V7U|1|DA|G|48
4V7U|1|DA|A|49
4V7U|1|DA|U|50
4V7U|1|DA|G|51
4V7U|1|DA|A|52
4V7U|1|DA|A|53
4V7U|1|DA|G|54
4V7U|1|DA|G|55
*
4V7U|1|DA|C|115
4V7U|1|DA|C|116
4V7U|1|DA|G|117
4V7U|1|DA|A|118
4V7U|1|DA|A|119
4V7U|1|DA|U|120
4V7U|1|DA|G|121
4V7U|1|DA|G|122
*
4V7U|1|DA|C|129
4V7U|1|DA|C|130
4V7U|1|DA|A|131
*
4V7U|1|DA|U|148
4V7U|1|DA|A|149
4V7U|1|DA|U|150
*
4V7U|1|DA|A|176
4V7U|1|DA|G|177
4V7U|1|DA|G|178

Current chains

Chain DA

23S rRNA

Nearby chains

Chain D2

50S ribosomal protein L34