J5_4V7W_010

3D structure

PDB id

4V7W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUGG*CUUGG*CCUGAAC*GGUAAUAG*CGAG

Length

28 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7W|1|CA|C|36
4V7W|1|CA|U|37
4V7W|1|CA|G|38
4V7W|1|CA|G|39
*
4V7W|1|CA|C|403
4V7W|1|CA|U|404
4V7W|1|CA|U|405
4V7W|1|CA|G|406
4V7W|1|CA|G|407
*
4V7W|1|CA|C|435
4V7W|1|CA|C|436
4V7W|1|CA|U|437
4V7W|1|CA|G|438
4V7W|1|CA|A|439
4V7W|1|CA|A|441
4V7W|1|CA|C|442
*
4V7W|1|CA|G|492
4V7W|1|CA|G|493
4V7W|1|CA|U|494
4V7W|1|CA|A|495
4V7W|1|CA|A|496
4V7W|1|CA|U|498
4V7W|1|CA|A|499
4V7W|1|CA|G|500
*
4V7W|1|CA|C|545
4V7W|1|CA|G|546
4V7W|1|CA|A|547
4V7W|1|CA|G|548

Current chains

Chain CA

16S rRNA

Nearby chains

Chain CD

30S ribosomal protein S4

Chain CL

30S ribosomal protein S12