J5_4V7W_011

3D structure

PDB id

4V7W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GCAAG*CGGACGGG*CAG*CAC*GGCAGC

Length

25 nucleotides

Bulged bases

4V7W|1|CA|A|109, 4V7W|1|CA|C|352

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7W|1|CA|G|57
4V7W|1|CA|C|58
4V7W|1|CA|A|59
4V7W|1|CA|A|60
4V7W|1|CA|G|61
*
4V7W|1|CA|C|106
4V7W|1|CA|G|107
4V7W|1|CA|G|108
4V7W|1|CA|A|109
4V7W|1|CA|C|110
4V7W|1|CA|G|111
4V7W|1|CA|G|112
4V7W|1|CA|G|113
*
4V7W|1|CA|C|314
4V7W|1|CA|A|315
4V7W|1|CA|G|316
*
4V7W|1|CA|C|337
4V7W|1|CA|A|338
4V7W|1|CA|C|339
*
4V7W|1|CA|G|350
4V7W|1|CA|G|351
4V7W|1|CA|C|352
4V7W|1|CA|A|353
4V7W|1|CA|G|354
4V7W|1|CA|C|355

Current chains

Chain CA

16S rRNA

Nearby chains

Chain CP

30S ribosomal protein S16

Chain CT

30S ribosomal protein S20

Chain DO

50S ribosomal protein L14