J5_4V7Y_002

3D structure

PDB id

4V7Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CAUGCAAG*CGGACGGG*CAG*CAC*GGCAGCAG

Length

30 nucleotides

Bulged bases

4V7Y|1|AA|A|109

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7Y|1|AA|C|54
4V7Y|1|AA|A|55
4V7Y|1|AA|U|56
4V7Y|1|AA|G|57
4V7Y|1|AA|C|58
4V7Y|1|AA|A|59
4V7Y|1|AA|A|60
4V7Y|1|AA|G|61
*
4V7Y|1|AA|C|106
4V7Y|1|AA|G|107
4V7Y|1|AA|G|108
4V7Y|1|AA|A|109
4V7Y|1|AA|C|110
4V7Y|1|AA|G|111
4V7Y|1|AA|G|112
4V7Y|1|AA|G|113
*
4V7Y|1|AA|C|314
4V7Y|1|AA|A|315
4V7Y|1|AA|G|316
*
4V7Y|1|AA|C|337
4V7Y|1|AA|A|338
4V7Y|1|AA|C|339
*
4V7Y|1|AA|G|350
4V7Y|1|AA|G|351
4V7Y|1|AA|C|352
4V7Y|1|AA|A|353
4V7Y|1|AA|G|354
4V7Y|1|AA|C|355
4V7Y|1|AA|A|356
4V7Y|1|AA|G|357

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AP

30S ribosomal protein S16

Chain AT

30S ribosomal protein S20

Chain BO

50S ribosomal protein L14

Chain BT

50S ribosomal protein L19