J5_4V7Y_004

3D structure

PDB id

4V7Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUAAAC*GGGUCGG*CGAGUAC*GGAAUCUG*UAAG

Length

32 nucleotides

Bulged bases

4V7Y|1|BA|U|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7Y|1|BA|C|268
4V7Y|1|BA|U|269
4V7Y|1|BA|A|270
4V7Y|1|BA|A|271
4V7Y|1|BA|A|271|||A
4V7Y|1|BA|C|271|||B
*
4V7Y|1|BA|G|271|||V
4V7Y|1|BA|G|271|||W
4V7Y|1|BA|G|271|||X
4V7Y|1|BA|U|271|||Y
4V7Y|1|BA|C|271|||Z
4V7Y|1|BA|G|272
4V7Y|1|BA|G|272|||B
*
4V7Y|1|BA|C|366
4V7Y|1|BA|G|370
4V7Y|1|BA|A|371
4V7Y|1|BA|G|372
4V7Y|1|BA|U|373
4V7Y|1|BA|A|374
4V7Y|1|BA|C|375
*
4V7Y|1|BA|G|399
4V7Y|1|BA|G|400
4V7Y|1|BA|A|401
4V7Y|1|BA|A|402
4V7Y|1|BA|U|403
4V7Y|1|BA|C|404
4V7Y|1|BA|U|405
4V7Y|1|BA|G|406
*
4V7Y|1|BA|U|421
4V7Y|1|BA|A|422
4V7Y|1|BA|A|423
4V7Y|1|BA|G|424

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B1

50S ribosomal protein L28

Chain BI

50S ribosomal protein L9