J5_4V8O_003

3D structure

PDB id

4V8O (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

CCGAUGAAG*CGAAUG*CG*CAC*GGGG

Length

24 nucleotides

Bulged bases

4V8O|1|BA|U|50

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8O|1|BA|C|45
4V8O|1|BA|C|47
4V8O|1|BA|G|48
4V8O|1|BA|A|49
4V8O|1|BA|U|50
4V8O|1|BA|G|51
4V8O|1|BA|A|52
4V8O|1|BA|A|53
4V8O|1|BA|G|54
*
4V8O|1|BA|C|116
4V8O|1|BA|G|117
4V8O|1|BA|A|118
4V8O|1|BA|A|119
4V8O|1|BA|U|120
4V8O|1|BA|G|121
*
4V8O|1|BA|C|130
4V8O|1|BA|G|131
*
4V8O|1|BA|C|148
4V8O|1|BA|A|149
4V8O|1|BA|C|150
*
4V8O|1|BA|G|176
4V8O|1|BA|G|177
4V8O|1|BA|G|178
4V8O|1|BA|G|179

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain B7

50S RIBOSOMAL PROTEIN L34

Chain BX

50S RIBOSOMAL PROTEIN L23