J5_4V8U_004

3D structure

PDB id

4V8U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

CUAAAC*GGGUCGUG*CGAGUAC*GGAAUCUG*UAAG

Length

33 nucleotides

Bulged bases

4V8U|1|BA|U|272|||A, 4V8U|1|BA|U|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8U|1|BA|C|268
4V8U|1|BA|U|269
4V8U|1|BA|A|270
4V8U|1|BA|A|271
4V8U|1|BA|A|271|||A
4V8U|1|BA|C|271|||B
*
4V8U|1|BA|G|271|||V
4V8U|1|BA|G|271|||W
4V8U|1|BA|G|271|||X
4V8U|1|BA|U|271|||Y
4V8U|1|BA|C|271|||Z
4V8U|1|BA|G|272
4V8U|1|BA|U|272|||A
4V8U|1|BA|G|272|||B
*
4V8U|1|BA|C|366
4V8U|1|BA|G|370
4V8U|1|BA|A|371
4V8U|1|BA|G|372
4V8U|1|BA|U|373
4V8U|1|BA|A|374
4V8U|1|BA|C|375
*
4V8U|1|BA|G|399
4V8U|1|BA|G|400
4V8U|1|BA|A|401
4V8U|1|BA|A|402
4V8U|1|BA|U|403
4V8U|1|BA|C|404
4V8U|1|BA|U|405
4V8U|1|BA|G|406
*
4V8U|1|BA|U|421
4V8U|1|BA|A|422
4V8U|1|BA|A|423
4V8U|1|BA|G|424

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain B1

50S RIBOSOMAL PROTEIN L28