J5_4V8U_011

3D structure

PDB id

4V8U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GCAAG*CGGACGGG*CAG*CAC*GGCAGC

Length

25 nucleotides

Bulged bases

4V8U|1|CA|A|109, 4V8U|1|CA|C|352

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8U|1|CA|G|57
4V8U|1|CA|C|58
4V8U|1|CA|A|59
4V8U|1|CA|A|60
4V8U|1|CA|G|61
*
4V8U|1|CA|C|106
4V8U|1|CA|G|107
4V8U|1|CA|G|108
4V8U|1|CA|A|109
4V8U|1|CA|C|110
4V8U|1|CA|G|111
4V8U|1|CA|G|112
4V8U|1|CA|G|113
*
4V8U|1|CA|C|314
4V8U|1|CA|A|315
4V8U|1|CA|G|316
*
4V8U|1|CA|C|337
4V8U|1|CA|A|338
4V8U|1|CA|C|339
*
4V8U|1|CA|G|350
4V8U|1|CA|G|351
4V8U|1|CA|C|352
4V8U|1|CA|A|353
4V8U|1|CA|G|354
4V8U|1|CA|C|355

Current chains

Chain CA

16S RIBOSOMAL RNA

Nearby chains

Chain CP

30S RIBOSOMAL PROTEIN S16

Chain CT

30S RIBOSOMAL PROTEIN S20

Chain CY

ELONGATION FACTOR G

Chain DO

50S RIBOSOMAL PROTEIN L14

Chain DT

50S RIBOSOMAL PROTEIN L19