J5_4W2E_002

3D structure

PDB id

4W2E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUAAAC*GGGUCGUG*CGAGUAC*GGAAUCUG*UAAG

Length

33 nucleotides

Bulged bases

4W2E|1|A|U|272|||A, 4W2E|1|A|U|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4W2E|1|A|C|268
4W2E|1|A|U|269
4W2E|1|A|A|270
4W2E|1|A|A|271
4W2E|1|A|A|271|||A
4W2E|1|A|C|271|||B
*
4W2E|1|A|G|271|||V
4W2E|1|A|G|271|||W
4W2E|1|A|G|271|||X
4W2E|1|A|U|271|||Y
4W2E|1|A|C|271|||Z
4W2E|1|A|G|272
4W2E|1|A|U|272|||A
4W2E|1|A|G|272|||B
*
4W2E|1|A|C|366
4W2E|1|A|G|370
4W2E|1|A|A|371
4W2E|1|A|G|372
4W2E|1|A|U|373
4W2E|1|A|A|374
4W2E|1|A|C|375
*
4W2E|1|A|G|399
4W2E|1|A|G|400
4W2E|1|A|A|401
4W2E|1|A|A|402
4W2E|1|A|U|403
4W2E|1|A|C|404
4W2E|1|A|U|405
4W2E|1|A|G|406
*
4W2E|1|A|U|421
4W2E|1|A|A|422
4W2E|1|A|A|423
4W2E|1|A|G|424

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L28