J5_4WCE_002

3D structure

PDB id

4WCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus

Experimental method

X-RAY DIFFRACTION

Resolution

3.53 Å

Loop

Sequence

CCAAAC*GGGUUGUAG*CUGAGUAC*GGAAUCUG*UAAG

Length

35 nucleotides

Bulged bases

4WCE|1|X|U|301, 4WCE|1|X|U|451

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WCE|1|X|C|271
4WCE|1|X|C|272
4WCE|1|X|A|273
4WCE|1|X|A|274
4WCE|1|X|A|275
4WCE|1|X|C|276
*
4WCE|1|X|G|295
4WCE|1|X|G|296
4WCE|1|X|G|297
4WCE|1|X|U|298
4WCE|1|X|U|299
4WCE|1|X|G|300
4WCE|1|X|U|301
4WCE|1|X|A|302
4WCE|1|X|G|303
*
4WCE|1|X|C|414
4WCE|1|X|U|415
4WCE|1|X|G|416
4WCE|1|X|A|417
4WCE|1|X|G|418
4WCE|1|X|U|419
4WCE|1|X|A|420
4WCE|1|X|C|421
*
4WCE|1|X|G|445
4WCE|1|X|G|446
4WCE|1|X|A|447
4WCE|1|X|A|448
4WCE|1|X|U|449
4WCE|1|X|C|450
4WCE|1|X|U|451
4WCE|1|X|G|452
*
4WCE|1|X|U|467
4WCE|1|X|A|468
4WCE|1|X|A|469
4WCE|1|X|G|470

Current chains

Chain X

23S rRNA

Nearby chains

Chain U

50S ribosomal protein L28