J5_4WFB_001

3D structure

PDB id

4WFB (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205

Experimental method

X-RAY DIFFRACTION

Resolution

3.43 Å

Loop

Sequence

CAAUGAAG*CGAAUG*CA*UAUC*GAAG

Length

24 nucleotides

Bulged bases

4WFB|1|X|U|50

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WFB|1|X|C|47
4WFB|1|X|A|48
4WFB|1|X|A|49
4WFB|1|X|U|50
4WFB|1|X|G|51
4WFB|1|X|A|52
4WFB|1|X|A|53
4WFB|1|X|G|54
*
4WFB|1|X|C|115
4WFB|1|X|G|116
4WFB|1|X|A|117
4WFB|1|X|A|118
4WFB|1|X|U|119
4WFB|1|X|G|120
*
4WFB|1|X|C|129
4WFB|1|X|A|130
*
4WFB|1|X|U|149
4WFB|1|X|A|150
4WFB|1|X|U|151
4WFB|1|X|C|152
*
4WFB|1|X|G|177
4WFB|1|X|A|178
4WFB|1|X|A|179
4WFB|1|X|G|180

Current chains

Chain X

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain Q

50S ribosomal protein L23