J5_4WPO_014

3D structure

PDB id

4WPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGAG*CGUAG*CGAG*CGCAAG*CAAAG

Length

24 nucleotides

Bulged bases

4WPO|1|CA|A|652|||B

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WPO|1|CA|C|601
4WPO|1|CA|G|602
4WPO|1|CA|A|603
4WPO|1|CA|G|604
*
4WPO|1|CA|C|624
4WPO|1|CA|G|625
4WPO|1|CA|U|626
4WPO|1|CA|A|627
4WPO|1|CA|G|628
*
4WPO|1|CA|C|635
4WPO|1|CA|G|636
4WPO|1|CA|A|637
4WPO|1|CA|G|638
*
4WPO|1|CA|C|650
4WPO|1|CA|G|651
4WPO|1|CA|C|652
4WPO|1|CA|A|652|||A
4WPO|1|CA|A|652|||B
4WPO|1|CA|G|652|||C
*
4WPO|1|CA|C|652|||V
4WPO|1|CA|A|653
4WPO|1|CA|A|654
4WPO|1|CA|A|655
4WPO|1|CA|G|656

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain C8

50S ribosomal protein L35

Chain CF

50S ribosomal protein L4

Chain CP

50S ribosomal protein L15