J5_4WQ1_007

3D structure

PDB id

4WQ1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGAG*CGUAG*CGAG*CGCAAAC*GAAAAG

Length

26 nucleotides

Bulged bases

4WQ1|1|14|A|654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQ1|1|14|C|601
4WQ1|1|14|G|602
4WQ1|1|14|A|603
4WQ1|1|14|G|604
*
4WQ1|1|14|C|624
4WQ1|1|14|G|625
4WQ1|1|14|U|626
4WQ1|1|14|A|627
4WQ1|1|14|G|628
*
4WQ1|1|14|C|635
4WQ1|1|14|G|636
4WQ1|1|14|A|637
4WQ1|1|14|G|638
*
4WQ1|1|14|C|650
4WQ1|1|14|G|651
4WQ1|1|14|C|652
4WQ1|1|14|A|653
4WQ1|1|14|A|654
4WQ1|1|14|A|654|||A
4WQ1|1|14|C|654|||B
*
4WQ1|1|14|G|654|||S
4WQ1|1|14|A|654|||T
4WQ1|1|14|A|654|||U
4WQ1|1|14|A|654|||V
4WQ1|1|14|A|655
4WQ1|1|14|G|656

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 35

50S ribosomal protein L15

Chain 39

50S ribosomal protein L4

Chain M5

50S ribosomal protein L35