J5_4WQF_002

3D structure

PDB id

4WQF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CUAAAC*GGGUCGUG*CGAGUAC*GGAAUCUG*UAAG

Length

33 nucleotides

Bulged bases

4WQF|1|AA|U|288, 4WQF|1|AA|U|432

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQF|1|AA|C|257
4WQF|1|AA|U|258
4WQF|1|AA|A|259
4WQF|1|AA|A|260
4WQF|1|AA|A|261
4WQF|1|AA|C|262
*
4WQF|1|AA|G|282
4WQF|1|AA|G|283
4WQF|1|AA|G|284
4WQF|1|AA|U|285
4WQF|1|AA|C|286
4WQF|1|AA|G|287
4WQF|1|AA|U|288
4WQF|1|AA|G|289
*
4WQF|1|AA|C|396
4WQF|1|AA|G|397
4WQF|1|AA|A|398
4WQF|1|AA|G|399
4WQF|1|AA|U|400
4WQF|1|AA|A|401
4WQF|1|AA|C|402
*
4WQF|1|AA|G|426
4WQF|1|AA|G|427
4WQF|1|AA|A|428
4WQF|1|AA|A|429
4WQF|1|AA|U|430
4WQF|1|AA|C|431
4WQF|1|AA|U|432
4WQF|1|AA|G|433
*
4WQF|1|AA|U|448
4WQF|1|AA|A|449
4WQF|1|AA|A|450
4WQF|1|AA|G|451

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains

Chain A1

50S ribosomal protein L28