J5_4WQF_011

3D structure

PDB id

4WQF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CUAAAC*GGGUCGUG*CGAGUAC*GGAAUCUG*UAAG

Length

33 nucleotides

Bulged bases

4WQF|1|CA|U|272|||A, 4WQF|1|CA|U|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQF|1|CA|C|268
4WQF|1|CA|U|269
4WQF|1|CA|A|270
4WQF|1|CA|A|271
4WQF|1|CA|A|271|||A
4WQF|1|CA|C|271|||B
*
4WQF|1|CA|G|271|||V
4WQF|1|CA|G|271|||W
4WQF|1|CA|G|271|||X
4WQF|1|CA|U|271|||Y
4WQF|1|CA|C|271|||Z
4WQF|1|CA|G|272
4WQF|1|CA|U|272|||A
4WQF|1|CA|G|272|||B
*
4WQF|1|CA|C|366
4WQF|1|CA|G|370
4WQF|1|CA|A|371
4WQF|1|CA|G|372
4WQF|1|CA|U|373
4WQF|1|CA|A|374
4WQF|1|CA|C|375
*
4WQF|1|CA|G|399
4WQF|1|CA|G|400
4WQF|1|CA|A|401
4WQF|1|CA|A|402
4WQF|1|CA|U|403
4WQF|1|CA|C|404
4WQF|1|CA|U|405
4WQF|1|CA|G|406
*
4WQF|1|CA|U|421
4WQF|1|CA|A|422
4WQF|1|CA|A|423
4WQF|1|CA|G|424

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain C1

50S ribosomal protein L28