J5_4WQR_008
3D structure
- PDB id
- 4WQR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.15 Å
Loop
- Sequence
- AAAAGACC*GGAUAACA*UCGAUGUC*GGUUCAG*CGGUCU
- Length
- 37 nucleotides
- Bulged bases
- 4WQR|1|14|A|2062, 4WQR|1|14|A|2448, 4WQR|1|14|U|2449, 4WQR|1|14|U|2609
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4WQR|1|14|A|2057
4WQR|1|14|A|2058
4WQR|1|14|A|2059
4WQR|1|14|A|2060
4WQR|1|14|G|2061
4WQR|1|14|A|2062
4WQR|1|14|C|2063
4WQR|1|14|C|2064
*
4WQR|1|14|G|2446
4WQR|1|14|G|2447
4WQR|1|14|A|2448
4WQR|1|14|U|2449
4WQR|1|14|A|2450
4WQR|1|14|A|2451
4WQR|1|14|C|2452
4WQR|1|14|A|2453
*
4WQR|1|14|U|2500
4WQR|1|14|C|2501
4WQR|1|14|G|2502
4WQR|1|14|A|2503
4WQR|1|14|U|2504
4WQR|1|14|G|2505
4WQR|1|14|U|2506
4WQR|1|14|C|2507
*
4WQR|1|14|G|2582
4WQR|1|14|G|2583
4WQR|1|14|U|2584
4WQR|1|14|U|2585
4WQR|1|14|C|2586
4WQR|1|14|A|2587
4WQR|1|14|G|2588
*
4WQR|1|14|C|2606
4WQR|1|14|G|2607
4WQR|1|14|G|2608
4WQR|1|14|U|2609
4WQR|1|14|C|2610
4WQR|1|14|U|2611
Current chains
- Chain 14
- 23S ribosomal RNA
Nearby chains
- Chain 19
- 50S ribosomal protein L2
- Chain 1L
- Transfer RNA; tRNA
- Chain 29
- 50S ribosomal protein L3
- Chain 2L
- Transfer RNA; tRNA
- Chain 39
- 50S ribosomal protein L4
- Chain A5
- 50S ribosomal protein L22
- Chain J5
- 50S ribosomal protein L32
Coloring options: