J5_4WSM_004

3D structure

PDB id

4WSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sites

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUAAAC*GGGUCGUG*CGAGUAC*GGAAUCUG*UAAG

Length

33 nucleotides

Bulged bases

4WSM|1|14|U|271|||C, 4WSM|1|14|U|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WSM|1|14|C|268
4WSM|1|14|U|269
4WSM|1|14|A|270
4WSM|1|14|A|270|||A
4WSM|1|14|A|270|||B
4WSM|1|14|C|270|||C
*
4WSM|1|14|G|270|||W
4WSM|1|14|G|270|||X
4WSM|1|14|G|270|||Y
4WSM|1|14|U|270|||Z
4WSM|1|14|C|271|||A
4WSM|1|14|G|271|||B
4WSM|1|14|U|271|||C
4WSM|1|14|G|271
*
4WSM|1|14|C|366
4WSM|1|14|G|370
4WSM|1|14|A|371
4WSM|1|14|G|372
4WSM|1|14|U|373
4WSM|1|14|A|374
4WSM|1|14|C|375
*
4WSM|1|14|G|399
4WSM|1|14|G|400
4WSM|1|14|A|401
4WSM|1|14|A|402
4WSM|1|14|U|403
4WSM|1|14|C|404
4WSM|1|14|U|405
4WSM|1|14|G|406
*
4WSM|1|14|U|421
4WSM|1|14|A|422
4WSM|1|14|A|423
4WSM|1|14|G|424

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 69

50S ribosomal protein L9

Chain F5

50S ribosomal protein L28