J5_4WU1_007

3D structure

PDB id

4WU1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGAG*CGUAG*CGAG*CGCAAAC*GAAAAG

Length

26 nucleotides

Bulged bases

4WU1|1|14|A|654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WU1|1|14|C|601
4WU1|1|14|G|602
4WU1|1|14|A|603
4WU1|1|14|G|604
*
4WU1|1|14|C|624
4WU1|1|14|G|625
4WU1|1|14|U|626
4WU1|1|14|A|627
4WU1|1|14|G|628
*
4WU1|1|14|C|635
4WU1|1|14|G|636
4WU1|1|14|A|637
4WU1|1|14|G|638
*
4WU1|1|14|C|650
4WU1|1|14|G|651
4WU1|1|14|C|652
4WU1|1|14|A|653
4WU1|1|14|A|654
4WU1|1|14|A|654|||A
4WU1|1|14|C|654|||B
*
4WU1|1|14|G|654|||S
4WU1|1|14|A|654|||T
4WU1|1|14|A|654|||U
4WU1|1|14|A|654|||V
4WU1|1|14|A|655
4WU1|1|14|G|656

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 35

50S ribosomal protein L15

Chain 39

50S ribosomal protein L4

Chain M5

50S ribosomal protein L35