J5_4WU1_009
3D structure
- PDB id
- 4WU1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Tyr and mRNA with G-U mismatch in the second position in the P-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- AAAAGACC*GGAUAACA*UCGAUGUC*GGUUCAG*CGGUCU
- Length
- 37 nucleotides
- Bulged bases
- 4WU1|1|14|A|2062, 4WU1|1|14|A|2448, 4WU1|1|14|U|2449, 4WU1|1|14|U|2506, 4WU1|1|14|U|2585, 4WU1|1|14|U|2609
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4WU1|1|14|A|2057
4WU1|1|14|A|2058
4WU1|1|14|A|2059
4WU1|1|14|A|2060
4WU1|1|14|G|2061
4WU1|1|14|A|2062
4WU1|1|14|C|2063
4WU1|1|14|C|2064
*
4WU1|1|14|G|2446
4WU1|1|14|G|2447
4WU1|1|14|A|2448
4WU1|1|14|U|2449
4WU1|1|14|A|2450
4WU1|1|14|A|2451
4WU1|1|14|C|2452
4WU1|1|14|A|2453
*
4WU1|1|14|U|2500
4WU1|1|14|C|2501
4WU1|1|14|G|2502
4WU1|1|14|A|2503
4WU1|1|14|U|2504
4WU1|1|14|G|2505
4WU1|1|14|U|2506
4WU1|1|14|C|2507
*
4WU1|1|14|G|2582
4WU1|1|14|G|2583
4WU1|1|14|U|2584
4WU1|1|14|U|2585
4WU1|1|14|C|2586
4WU1|1|14|A|2587
4WU1|1|14|G|2588
*
4WU1|1|14|C|2606
4WU1|1|14|G|2607
4WU1|1|14|G|2608
4WU1|1|14|U|2609
4WU1|1|14|C|2610
4WU1|1|14|U|2611
Current chains
- Chain 14
- 23S ribosomal RNA
Nearby chains
- Chain 19
- 50S ribosomal protein L2
- Chain 29
- 50S ribosomal protein L3
- Chain 2L
- Transfer RNA; tRNA
- Chain 39
- 50S ribosomal protein L4
- Chain 45
- 50S ribosomal protein L16
- Chain J5
- 50S ribosomal protein L32
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