J5_4WZO_008

3D structure

PDB id

4WZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-fMet and mRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

AAAAGACC*GGAUAACA*UCGAUGUC*GGUUCAG*CGGUCU

Length

37 nucleotides

Bulged bases

4WZO|1|14|A|2448, 4WZO|1|14|U|2449, 4WZO|1|14|U|2585, 4WZO|1|14|U|2609

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WZO|1|14|A|2057
4WZO|1|14|A|2058
4WZO|1|14|A|2059
4WZO|1|14|A|2060
4WZO|1|14|G|2061
4WZO|1|14|A|2062
4WZO|1|14|C|2063
4WZO|1|14|C|2064
*
4WZO|1|14|G|2446
4WZO|1|14|G|2447
4WZO|1|14|A|2448
4WZO|1|14|U|2449
4WZO|1|14|A|2450
4WZO|1|14|A|2451
4WZO|1|14|C|2452
4WZO|1|14|A|2453
*
4WZO|1|14|U|2500
4WZO|1|14|C|2501
4WZO|1|14|G|2502
4WZO|1|14|A|2503
4WZO|1|14|U|2504
4WZO|1|14|G|2505
4WZO|1|14|U|2506
4WZO|1|14|C|2507
*
4WZO|1|14|G|2582
4WZO|1|14|G|2583
4WZO|1|14|U|2584
4WZO|1|14|U|2585
4WZO|1|14|C|2586
4WZO|1|14|A|2587
4WZO|1|14|G|2588
*
4WZO|1|14|C|2606
4WZO|1|14|G|2607
4WZO|1|14|G|2608
4WZO|1|14|U|2609
4WZO|1|14|C|2610
4WZO|1|14|U|2611

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 19

50S ribosomal protein L2

Chain 29

50S ribosomal protein L3

Chain 2L

Transfer RNA; tRNA

Chain 35

50S ribosomal protein L15

Chain 39

50S ribosomal protein L4

Chain A5

50S ribosomal protein L22

Chain J5

50S ribosomal protein L32