J5_4YZV_007
3D structure
- PDB id
- 4YZV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codon
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAG*CGUAG*CGAG*CGCAAG*CAAAG
- Length
- 24 nucleotides
- Bulged bases
- 4YZV|1|RA|A|654
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4YZV|1|RA|C|601
4YZV|1|RA|G|602
4YZV|1|RA|A|603
4YZV|1|RA|G|604
*
4YZV|1|RA|C|624
4YZV|1|RA|G|625
4YZV|1|RA|U|626
4YZV|1|RA|A|627
4YZV|1|RA|G|628
*
4YZV|1|RA|C|635
4YZV|1|RA|G|636
4YZV|1|RA|A|637
4YZV|1|RA|G|638
*
4YZV|1|RA|C|650
4YZV|1|RA|G|651
4YZV|1|RA|C|652
4YZV|1|RA|A|653
4YZV|1|RA|A|654
4YZV|1|RA|G|654|||A
*
4YZV|1|RA|C|654|||T
4YZV|1|RA|A|654|||U
4YZV|1|RA|A|654|||V
4YZV|1|RA|A|655
4YZV|1|RA|G|656
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R8
- 50S ribosomal protein L35
- Chain RF
- 50S ribosomal protein L4
- Chain RP
- 50S ribosomal protein L15
Coloring options: