J5_4ZSN_004

3D structure

PDB id

4ZSN (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-wild-type HigB toxin complex bound to a AAA lysine codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CUAAAC*GGGUCGUG*CGAGUAC*GGAAUCUG*UAAG

Length

33 nucleotides

Bulged bases

4ZSN|1|RA|U|271|||C, 4ZSN|1|RA|U|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4ZSN|1|RA|C|268
4ZSN|1|RA|U|269
4ZSN|1|RA|A|270
4ZSN|1|RA|A|270|||A
4ZSN|1|RA|A|270|||B
4ZSN|1|RA|C|270|||C
*
4ZSN|1|RA|G|270|||W
4ZSN|1|RA|G|270|||X
4ZSN|1|RA|G|270|||Y
4ZSN|1|RA|U|270|||Z
4ZSN|1|RA|C|271|||A
4ZSN|1|RA|G|271|||B
4ZSN|1|RA|U|271|||C
4ZSN|1|RA|G|271
*
4ZSN|1|RA|C|366
4ZSN|1|RA|G|370
4ZSN|1|RA|A|371
4ZSN|1|RA|G|372
4ZSN|1|RA|U|373
4ZSN|1|RA|A|374
4ZSN|1|RA|C|375
*
4ZSN|1|RA|G|399
4ZSN|1|RA|G|400
4ZSN|1|RA|A|401
4ZSN|1|RA|A|402
4ZSN|1|RA|U|403
4ZSN|1|RA|C|404
4ZSN|1|RA|U|405
4ZSN|1|RA|G|406
*
4ZSN|1|RA|U|421
4ZSN|1|RA|A|422
4ZSN|1|RA|A|423
4ZSN|1|RA|G|424

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R1

50S ribosomal protein L28

Chain RI

50S ribosomal protein L9