J5_5ADY_004
3D structure
- PDB id
- 5ADY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with HflX
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- GAAAGACC*GGAUAACAGGC*GCACCUCGAUGUCG*UGGGUUUAGAAC*GUUCGGUCC
- Length
- 54 nucleotides
- Bulged bases
- 5ADY|1|B|A|2062, 5ADY|1|B|A|2448, 5ADY|1|B|U|2449, 5ADY|1|B|U|2585, 5ADY|1|B|U|2609
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5ADY|1|B|G|2057
5ADY|1|B|A|2058
5ADY|1|B|A|2059
5ADY|1|B|A|2060
5ADY|1|B|G|2061
5ADY|1|B|A|2062
5ADY|1|B|C|2063
5ADY|1|B|C|2064
*
5ADY|1|B|G|2446
5ADY|1|B|G|2447
5ADY|1|B|A|2448
5ADY|1|B|U|2449
5ADY|1|B|A|2450
5ADY|1|B|A|2451
5ADY|1|B|C|2452
5ADY|1|B|A|2453
5ADY|1|B|G|2454
5ADY|1|B|G|2455
5ADY|1|B|C|2456
*
5ADY|1|B|G|2495
5ADY|1|B|C|2496
5ADY|1|B|A|2497
5ADY|1|B|C|2498
5ADY|1|B|C|2499
5ADY|1|B|U|2500
5ADY|1|B|C|2501
5ADY|1|B|G|2502
5ADY|1|B|A|2503
5ADY|1|B|U|2504
5ADY|1|B|G|2505
5ADY|1|B|U|2506
5ADY|1|B|C|2507
5ADY|1|B|G|2508
*
5ADY|1|B|U|2580
5ADY|1|B|G|2581
5ADY|1|B|G|2582
5ADY|1|B|G|2583
5ADY|1|B|U|2584
5ADY|1|B|U|2585
5ADY|1|B|U|2586
5ADY|1|B|A|2587
5ADY|1|B|G|2588
5ADY|1|B|A|2589
5ADY|1|B|A|2590
5ADY|1|B|C|2591
*
5ADY|1|B|G|2603
5ADY|1|B|U|2604
5ADY|1|B|U|2605
5ADY|1|B|C|2606
5ADY|1|B|G|2607
5ADY|1|B|G|2608
5ADY|1|B|U|2609
5ADY|1|B|C|2610
5ADY|1|B|C|2611
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain 0
- 50S RIBOSOMAL PROTEIN L32
- Chain 6
- GTPASE HFLX
- Chain C
- 50S RIBOSOMAL PROTEIN L2
- Chain D
- 50S RIBOSOMAL PROTEIN L3
- Chain E
- 50S RIBOSOMAL PROTEIN L4
- Chain L
- 50S RIBOSOMAL PROTEIN L15
- Chain M
- 50S RIBOSOMAL PROTEIN L16
- Chain S
- 50S RIBOSOMAL PROTEIN L22
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