J5_5AJ4_001
3D structure
- PDB id
- 5AJ4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 55S mammalian mitoribosome.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CCAGAAAAAA*UACC*GUUG*CUAAUC*GAAGCAAUAAUG
- Length
- 36 nucleotides
- Bulged bases
- 5AJ4|1|BA|A|204, 5AJ4|1|BA|G|624, 5AJ4|1|BA|U|631
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5AJ4|1|BA|C|200
5AJ4|1|BA|C|201
5AJ4|1|BA|A|202
5AJ4|1|BA|G|203
5AJ4|1|BA|A|204
5AJ4|1|BA|A|205
5AJ4|1|BA|A|206
5AJ4|1|BA|A|207
5AJ4|1|BA|A|208
5AJ4|1|BA|A|209
*
5AJ4|1|BA|U|235
5AJ4|1|BA|A|236
5AJ4|1|BA|C|237
5AJ4|1|BA|C|238
*
5AJ4|1|BA|G|355
5AJ4|1|BA|U|356
5AJ4|1|BA|U|357
5AJ4|1|BA|G|358
*
5AJ4|1|BA|C|603
5AJ4|1|BA|U|604
5AJ4|1|BA|A|605
5AJ4|1|BA|A|606
5AJ4|1|BA|U|607
5AJ4|1|BA|C|608
*
5AJ4|1|BA|G|621
5AJ4|1|BA|A|622
5AJ4|1|BA|A|623
5AJ4|1|BA|G|624
5AJ4|1|BA|C|625
5AJ4|1|BA|A|626
5AJ4|1|BA|A|627
5AJ4|1|BA|U|628
5AJ4|1|BA|A|629
5AJ4|1|BA|A|630
5AJ4|1|BA|U|631
5AJ4|1|BA|G|632
Current chains
- Chain BA
- MITORIBOSOMAL 16S Ribosomal RNA
Nearby chains
- Chain B8
- MITORIBOSOMAL PROTEIN BL35M, MRPL35
- Chain BF
- MITORIBOSOMAL PROTEIN UL4M, MRPL4
- Chain BP
- MITORIBOSOMAL PROTEIN UL15M, MRPL15
- Chain BU
- MITORIBOSOMAL PROTEIN BL20M, MRPL20
- Chain BV
- MITORIBOSOMAL PROTEIN BL21M, MRPL21
- Chain Bh
- MITORIBOSOMAL PROTEIN ML44, MRPL44
- Chain Bl
- MITORIBOSOMAL PROTEIN ML49, MRPL49
- Chain Bn
- MITORIBOSOMAL PROTEIN ML51, MRPL51
Coloring options: