3D structure

PDB id
5CZP (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S termination complex containing E. coli RF2
Experimental method
X-RAY DIFFRACTION
Resolution
3.3 Å

Loop

Sequence
CGAG*CGUAG*CGAG*CGCAAG*CAAAG
Length
24 nucleotides
Bulged bases
5CZP|1|RA|A|652|||C
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5CZP|1|RA|C|601
5CZP|1|RA|G|602
5CZP|1|RA|A|603
5CZP|1|RA|G|604
*
5CZP|1|RA|C|624
5CZP|1|RA|G|625
5CZP|1|RA|U|626
5CZP|1|RA|A|627
5CZP|1|RA|G|628
*
5CZP|1|RA|C|635
5CZP|1|RA|G|636
5CZP|1|RA|A|637
5CZP|1|RA|G|638
*
5CZP|1|RA|C|650
5CZP|1|RA|G|651
5CZP|1|RA|C|652|||A
5CZP|1|RA|A|652|||B
5CZP|1|RA|A|652|||C
5CZP|1|RA|G|652|||D
*
5CZP|1|RA|C|652|||W
5CZP|1|RA|A|653
5CZP|1|RA|A|654
5CZP|1|RA|A|655
5CZP|1|RA|G|656

Current chains

Chain RA
23S rRNA

Nearby chains

Chain R8
50S ribosomal protein L35
Chain RF
50S ribosomal protein L4
Chain RP
50S ribosomal protein L15

Coloring options:

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