J5_5DFE_007
3D structure
- PDB id
- 5DFE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S termination complex containing E. coli RF2
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAG*CGUAG*CGAG*CGCAAG*CAAAG
- Length
- 24 nucleotides
- Bulged bases
- 5DFE|1|RA|A|652|||C
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5DFE|1|RA|C|601
5DFE|1|RA|G|602
5DFE|1|RA|A|603
5DFE|1|RA|G|604
*
5DFE|1|RA|C|624
5DFE|1|RA|G|625
5DFE|1|RA|U|626
5DFE|1|RA|A|627
5DFE|1|RA|G|628
*
5DFE|1|RA|C|635
5DFE|1|RA|G|636
5DFE|1|RA|A|637
5DFE|1|RA|G|638
*
5DFE|1|RA|C|650
5DFE|1|RA|G|651
5DFE|1|RA|C|652|||A
5DFE|1|RA|A|652|||B
5DFE|1|RA|A|652|||C
5DFE|1|RA|G|652|||D
*
5DFE|1|RA|C|652|||W
5DFE|1|RA|A|653
5DFE|1|RA|A|654
5DFE|1|RA|A|655
5DFE|1|RA|G|656
Current chains
- Chain RA
- T23S rRNA
Nearby chains
- Chain R8
- 50S ribosomal protein L35
- Chain RF
- 50S ribosomal protein L4
- Chain RP
- 50S ribosomal protein L15
Coloring options: