J5_5FCJ_007

3D structure

PDB id

5FCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUUGU*AAAUAAC*GGAAUGAG*CGAGGAACAAU*AUAG

Length

35 nucleotides

Bulged bases

5FCJ|1|2|A|538, 5FCJ|1|2|A|541, 5FCJ|1|2|A|544

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5FCJ|1|2|C|31
5FCJ|1|2|U|32
5FCJ|1|2|U|33
5FCJ|1|2|G|34
5FCJ|1|2|U|35
*
5FCJ|1|2|A|473
5FCJ|1|2|A|474
5FCJ|1|2|A|475
5FCJ|1|2|U|476
5FCJ|1|2|A|477
5FCJ|1|2|A|478
5FCJ|1|2|C|479
*
5FCJ|1|2|G|509
5FCJ|1|2|G|510
5FCJ|1|2|A|511
5FCJ|1|2|A|512
5FCJ|1|2|U|513
5FCJ|1|2|G|514
5FCJ|1|2|A|515
5FCJ|1|2|G|516
*
5FCJ|1|2|C|536
5FCJ|1|2|G|537
5FCJ|1|2|A|538
5FCJ|1|2|G|539
5FCJ|1|2|G|540
5FCJ|1|2|A|541
5FCJ|1|2|A|542
5FCJ|1|2|C|543
5FCJ|1|2|A|544
5FCJ|1|2|A|545
5FCJ|1|2|U|546
*
5FCJ|1|2|A|592
5FCJ|1|2|U|593
5FCJ|1|2|A|594
5FCJ|1|2|G|595

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain D3

40S ribosomal protein S23-A

Chain E0

40S ribosomal protein S30-A

Chain S9

40S ribosomal protein S9-A