3D structure

PDB id
5HAU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
CUAAAC*GGGUCGUG*CGAGUAC*GGAAUCUG*UAAG
Length
33 nucleotides
Bulged bases
5HAU|1|1A|U|287, 5HAU|1|1A|U|431
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5HAU|1|1A|C|256
5HAU|1|1A|U|257
5HAU|1|1A|A|258
5HAU|1|1A|A|259
5HAU|1|1A|A|260
5HAU|1|1A|C|261
*
5HAU|1|1A|G|281
5HAU|1|1A|G|282
5HAU|1|1A|G|283
5HAU|1|1A|U|284
5HAU|1|1A|C|285
5HAU|1|1A|G|286
5HAU|1|1A|U|287
5HAU|1|1A|G|288
*
5HAU|1|1A|C|395
5HAU|1|1A|G|396
5HAU|1|1A|A|397
5HAU|1|1A|G|398
5HAU|1|1A|U|399
5HAU|1|1A|A|400
5HAU|1|1A|C|401
*
5HAU|1|1A|G|425
5HAU|1|1A|G|426
5HAU|1|1A|A|427
5HAU|1|1A|A|428
5HAU|1|1A|U|429
5HAU|1|1A|C|430
5HAU|1|1A|U|431
5HAU|1|1A|G|432
*
5HAU|1|1A|U|447
5HAU|1|1A|A|448
5HAU|1|1A|A|449
5HAU|1|1A|G|450

Current chains

Chain 1A
23S Ribosomal RNA

Nearby chains

Chain 1Z
50S ribosomal protein L28

Coloring options:

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