J5_5HAU_014

3D structure

PDB id

5HAU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGAG*CGUAG*CGAG*CGCAAG*CAAAG

Length

24 nucleotides

Bulged bases

5HAU|1|2A|A|678

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5HAU|1|2A|C|623
5HAU|1|2A|G|624
5HAU|1|2A|A|625
5HAU|1|2A|G|626
*
5HAU|1|2A|C|648
5HAU|1|2A|G|649
5HAU|1|2A|U|650
5HAU|1|2A|A|651
5HAU|1|2A|G|652
*
5HAU|1|2A|C|659
5HAU|1|2A|G|660
5HAU|1|2A|A|661
5HAU|1|2A|G|662
*
5HAU|1|2A|C|674
5HAU|1|2A|G|675
5HAU|1|2A|C|676
5HAU|1|2A|A|677
5HAU|1|2A|A|678
5HAU|1|2A|G|679
*
5HAU|1|2A|C|698
5HAU|1|2A|A|699
5HAU|1|2A|A|700
5HAU|1|2A|A|701
5HAU|1|2A|G|702

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 26

50S ribosomal protein L35

Chain 2F

50S ribosomal protein L4

Chain 2N

50S ribosomal protein L15