J5_5JTE_011
3D structure
- PDB id
- 5JTE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCGAUGUC*GGUUUAG*CGGUCC
- Length
- 37 nucleotides
- Bulged bases
- 5JTE|1|BA|A|2062, 5JTE|1|BA|A|2448, 5JTE|1|BA|U|2449, 5JTE|1|BA|U|2506, 5JTE|1|BA|U|2609
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5JTE|1|BA|G|2057
5JTE|1|BA|A|2058
5JTE|1|BA|A|2059
5JTE|1|BA|A|2060
5JTE|1|BA|G|2061
5JTE|1|BA|A|2062
5JTE|1|BA|C|2063
5JTE|1|BA|C|2064
*
5JTE|1|BA|G|2446
5JTE|1|BA|G|2447
5JTE|1|BA|A|2448
5JTE|1|BA|U|2449
5JTE|1|BA|A|2450
5JTE|1|BA|A|2451
5JTE|1|BA|C|2452
5JTE|1|BA|A|2453
*
5JTE|1|BA|U|2500
5JTE|1|BA|C|2501
5JTE|1|BA|G|2502
5JTE|1|BA|A|2503
5JTE|1|BA|U|2504
5JTE|1|BA|G|2505
5JTE|1|BA|U|2506
5JTE|1|BA|C|2507
*
5JTE|1|BA|G|2582
5JTE|1|BA|G|2583
5JTE|1|BA|U|2584
5JTE|1|BA|U|2585
5JTE|1|BA|U|2586
5JTE|1|BA|A|2587
5JTE|1|BA|G|2588
*
5JTE|1|BA|C|2606
5JTE|1|BA|G|2607
5JTE|1|BA|G|2608
5JTE|1|BA|U|2609
5JTE|1|BA|C|2610
5JTE|1|BA|C|2611
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain AW
- Transfer RNA; tRNA
- Chain AX
- Transfer RNA; tRNA
- Chain B0
- 50S ribosomal protein L32
- Chain B5
- ErmBL
- Chain BC
- 50S ribosomal protein L2
- Chain BD
- 50S ribosomal protein L3
- Chain BE
- 50S ribosomal protein L4
- Chain BL
- 50S ribosomal protein L15
- Chain BM
- 50S ribosomal protein L16
- Chain BS
- 50S ribosomal protein L22
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