J5_5KPV_008
3D structure
- PDB id
- 5KPV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RelA bound to ribosome in presence of A/R tRNA (Structure II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCGAUGUC*GGUUUAG*CGGUCC
- Length
- 37 nucleotides
- Bulged bases
- 5KPV|1|27|A|2448, 5KPV|1|27|G|2505, 5KPV|1|27|U|2506, 5KPV|1|27|U|2609, 5KPV|1|27|C|2610
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5KPV|1|27|G|2057
5KPV|1|27|A|2058
5KPV|1|27|A|2059
5KPV|1|27|A|2060
5KPV|1|27|G|2061
5KPV|1|27|A|2062
5KPV|1|27|C|2063
5KPV|1|27|C|2064
*
5KPV|1|27|G|2446
5KPV|1|27|G|2447
5KPV|1|27|A|2448
5KPV|1|27|U|2449
5KPV|1|27|A|2450
5KPV|1|27|A|2451
5KPV|1|27|C|2452
5KPV|1|27|A|2453
*
5KPV|1|27|U|2500
5KPV|1|27|C|2501
5KPV|1|27|G|2502
5KPV|1|27|A|2503
5KPV|1|27|U|2504
5KPV|1|27|G|2505
5KPV|1|27|U|2506
5KPV|1|27|C|2507
*
5KPV|1|27|G|2582
5KPV|1|27|G|2583
5KPV|1|27|U|2584
5KPV|1|27|U|2585
5KPV|1|27|U|2586
5KPV|1|27|A|2587
5KPV|1|27|G|2588
*
5KPV|1|27|C|2606
5KPV|1|27|G|2607
5KPV|1|27|G|2608
5KPV|1|27|U|2609
5KPV|1|27|C|2610
5KPV|1|27|C|2611
Current chains
- Chain 27
- 23S ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L32
- Chain 31
- Transfer RNA; tRNA
- Chain A
- 50S ribosomal protein L2
- Chain B
- 50S ribosomal protein L3
- Chain C
- 50S ribosomal protein L4
- Chain K
- 50S ribosomal protein L15
- Chain L
- 50S ribosomal protein L16
- Chain R
- 50S ribosomal protein L22
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