J5_5LI0_001
3D structure
- PDB id
- 5LI0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CGAUGAAG*CGAAUG*CA*UAUC*GAAG
- Length
- 24 nucleotides
- Bulged bases
- 5LI0|1|A|U|50
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LI0|1|A|C|47
5LI0|1|A|G|48
5LI0|1|A|A|49
5LI0|1|A|U|50
5LI0|1|A|G|51
5LI0|1|A|A|52
5LI0|1|A|A|53
5LI0|1|A|G|54
*
5LI0|1|A|C|115
5LI0|1|A|G|116
5LI0|1|A|A|117
5LI0|1|A|A|118
5LI0|1|A|U|119
5LI0|1|A|G|120
*
5LI0|1|A|C|129
5LI0|1|A|A|130
*
5LI0|1|A|U|149
5LI0|1|A|A|150
5LI0|1|A|U|151
5LI0|1|A|C|152
*
5LI0|1|A|G|177
5LI0|1|A|A|178
5LI0|1|A|A|179
5LI0|1|A|G|180
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 6
- 50S ribosomal protein L34
- Chain W
- 50S ribosomal protein L23
Coloring options: