J5_5LI0_002
3D structure
- PDB id
- 5LI0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CCAAAC*GGGUUGUAG*CUGAGUAC*GGAAUCUG*UAAG
- Length
- 35 nucleotides
- Bulged bases
- 5LI0|1|A|U|301, 5LI0|1|A|U|451
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LI0|1|A|C|271
5LI0|1|A|C|272
5LI0|1|A|A|273
5LI0|1|A|A|274
5LI0|1|A|A|275
5LI0|1|A|C|276
*
5LI0|1|A|G|295
5LI0|1|A|G|296
5LI0|1|A|G|297
5LI0|1|A|U|298
5LI0|1|A|U|299
5LI0|1|A|G|300
5LI0|1|A|U|301
5LI0|1|A|A|302
5LI0|1|A|G|303
*
5LI0|1|A|C|414
5LI0|1|A|U|415
5LI0|1|A|G|416
5LI0|1|A|A|417
5LI0|1|A|G|418
5LI0|1|A|U|419
5LI0|1|A|A|420
5LI0|1|A|C|421
*
5LI0|1|A|G|445
5LI0|1|A|G|446
5LI0|1|A|A|447
5LI0|1|A|A|448
5LI0|1|A|U|449
5LI0|1|A|C|450
5LI0|1|A|U|451
5LI0|1|A|G|452
*
5LI0|1|A|U|467
5LI0|1|A|A|468
5LI0|1|A|A|469
5LI0|1|A|G|470
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L28
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