J5_5LZS_007

3D structure

PDB id

5LZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.31 Å

Loop

Sequence

CUUGU*AAAUAAC*GGAAUGAG*CGAGGAUCCAU*AUAG

Length

35 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZS|1|9|C|30
5LZS|1|9|U|31
5LZS|1|9|U|32
5LZS|1|9|G|33
5LZS|1|9|U|34
*
5LZS|1|9|A|521
5LZS|1|9|A|522
5LZS|1|9|A|523
5LZS|1|9|U|524
5LZS|1|9|A|525
5LZS|1|9|A|526
5LZS|1|9|C|527
*
5LZS|1|9|G|558
5LZS|1|9|G|559
5LZS|1|9|A|560
5LZS|1|9|A|561
5LZS|1|9|U|562
5LZS|1|9|G|563
5LZS|1|9|A|564
5LZS|1|9|G|565
*
5LZS|1|9|C|585
5LZS|1|9|G|586
5LZS|1|9|A|587
5LZS|1|9|G|588
5LZS|1|9|G|589
5LZS|1|9|A|590
5LZS|1|9|U|591
5LZS|1|9|C|592
5LZS|1|9|C|593
5LZS|1|9|A|594
5LZS|1|9|U|595
*
5LZS|1|9|A|641
5LZS|1|9|U|642
5LZS|1|9|A|643
5LZS|1|9|G|644

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain JJ

Ribosomal protein S9 (Predicted)

Chain XX

uS12

Chain ee

eS30