J5_5LZT_008

3D structure

PDB id

5LZT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal termination complex with eRF1 and eRF3.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

CUUGU*AAAUAAC*GGAAUGAG*CGAGGAUCCAU*AUAG

Length

35 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZT|1|9|C|30
5LZT|1|9|U|31
5LZT|1|9|U|32
5LZT|1|9|G|33
5LZT|1|9|U|34
*
5LZT|1|9|A|521
5LZT|1|9|A|522
5LZT|1|9|A|523
5LZT|1|9|U|524
5LZT|1|9|A|525
5LZT|1|9|A|526
5LZT|1|9|C|527
*
5LZT|1|9|G|558
5LZT|1|9|G|559
5LZT|1|9|A|560
5LZT|1|9|A|561
5LZT|1|9|U|562
5LZT|1|9|G|563
5LZT|1|9|A|564
5LZT|1|9|G|565
*
5LZT|1|9|C|585
5LZT|1|9|G|586
5LZT|1|9|A|587
5LZT|1|9|G|588
5LZT|1|9|G|589
5LZT|1|9|A|590
5LZT|1|9|U|591
5LZT|1|9|C|592
5LZT|1|9|C|593
5LZT|1|9|A|594
5LZT|1|9|U|595
*
5LZT|1|9|A|641
5LZT|1|9|U|642
5LZT|1|9|A|643
5LZT|1|9|G|644

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain JJ

uS4

Chain XX

uS12

Chain ee

eS30