J5_5LZT_010

3D structure

PDB id

5LZT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal termination complex with eRF1 and eRF3.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

GUCGCUC*GGG*UG*CCG*CGACC

Length

20 nucleotides

Bulged bases

5LZT|1|9|G|126, 5LZT|1|9|C|127

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZT|1|9|G|123
5LZT|1|9|U|124
5LZT|1|9|C|125
5LZT|1|9|G|126
5LZT|1|9|C|127
5LZT|1|9|U|128
5LZT|1|9|C|129
*
5LZT|1|9|G|183
5LZT|1|9|G|184
5LZT|1|9|G|185
*
5LZT|1|9|U|214
5LZT|1|9|G|215
*
5LZT|1|9|C|310
5LZT|1|9|C|311
5LZT|1|9|G|312
*
5LZT|1|9|C|337
5LZT|1|9|G|338
5LZT|1|9|A|339
5LZT|1|9|C|340
5LZT|1|9|C|341

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain EE

eS4

Chain GG

eS6

Chain II

eS8