J5_5LZV_010

3D structure

PDB id

5LZV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.35 Å

Loop

Sequence

GUCGCUC*GGG*UG*CCG*CGACC

Length

20 nucleotides

Bulged bases

5LZV|1|9|G|126, 5LZV|1|9|C|127

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZV|1|9|G|123
5LZV|1|9|U|124
5LZV|1|9|C|125
5LZV|1|9|G|126
5LZV|1|9|C|127
5LZV|1|9|U|128
5LZV|1|9|C|129
*
5LZV|1|9|G|183
5LZV|1|9|G|184
5LZV|1|9|G|185
*
5LZV|1|9|U|214
5LZV|1|9|G|215
*
5LZV|1|9|C|310
5LZV|1|9|C|311
5LZV|1|9|G|312
*
5LZV|1|9|C|337
5LZV|1|9|G|338
5LZV|1|9|A|339
5LZV|1|9|C|340
5LZV|1|9|C|341

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain EE

eS4

Chain GG

eS6

Chain II

eS8