J5_5MLC_007
3D structure
- PDB id
- 5MLC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the spinach chloroplast ribosome reveals the location of plastid-specific ribosomal proteins and extensions
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAAAGACC*GGAUAACA*UCGAUGUC*GGUUCAG*CGGUCC
- Length
- 37 nucleotides
- Bulged bases
- 5MLC|1|A|A|2076, 5MLC|1|A|A|2465, 5MLC|1|A|U|2523, 5MLC|1|A|U|2602, 5MLC|1|A|U|2626
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5MLC|1|A|G|2071
5MLC|1|A|A|2072
5MLC|1|A|A|2073
5MLC|1|A|A|2074
5MLC|1|A|G|2075
5MLC|1|A|A|2076
5MLC|1|A|C|2077
5MLC|1|A|C|2078
*
5MLC|1|A|G|2463
5MLC|1|A|G|2464
5MLC|1|A|A|2465
5MLC|1|A|U|2466
5MLC|1|A|A|2467
5MLC|1|A|A|2468
5MLC|1|A|C|2469
5MLC|1|A|A|2470
*
5MLC|1|A|U|2517
5MLC|1|A|C|2518
5MLC|1|A|G|2519
5MLC|1|A|A|2520
5MLC|1|A|U|2521
5MLC|1|A|G|2522
5MLC|1|A|U|2523
5MLC|1|A|C|2524
*
5MLC|1|A|G|2599
5MLC|1|A|G|2600
5MLC|1|A|U|2601
5MLC|1|A|U|2602
5MLC|1|A|C|2603
5MLC|1|A|A|2604
5MLC|1|A|G|2605
*
5MLC|1|A|C|2623
5MLC|1|A|G|2624
5MLC|1|A|G|2625
5MLC|1|A|U|2626
5MLC|1|A|C|2627
5MLC|1|A|C|2628
Current chains
- Chain A
- 23S ribosomal RNA, chloroplastic
Nearby chains
- Chain 2
- 50S ribosomal protein L32, chloroplastic
- Chain D
- 50S ribosomal protein L2, chloroplastic
- Chain E
- 50S ribosomal protein L3, chloroplastic
- Chain F
- 50S ribosomal protein L4, chloroplastic
- Chain N
- 50S ribosomal protein L15, chloroplastic
- Chain O
- 50S ribosomal protein L16, chloroplastic
- Chain U
- 50S ribosomal protein L22, chloroplastic
- Chain X
- 50S ribosomal protein L27, chloroplastic
Coloring options: