J5_5MRE_004

3D structure

PDB id

5MRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

CUAA*UAG*CAUAAA*UUUAAUAG*CGAG

Length

25 nucleotides

Bulged bases

5MRE|1|aa|U|611

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MRE|1|aa|C|43
5MRE|1|aa|U|44
5MRE|1|aa|A|45
5MRE|1|aa|A|46
*
5MRE|1|aa|U|407
5MRE|1|aa|A|408
5MRE|1|aa|G|409
*
5MRE|1|aa|C|508
5MRE|1|aa|A|509
5MRE|1|aa|U|510
5MRE|1|aa|A|511
5MRE|1|aa|A|512
5MRE|1|aa|A|513
*
5MRE|1|aa|U|606
5MRE|1|aa|U|607
5MRE|1|aa|U|608
5MRE|1|aa|A|609
5MRE|1|aa|A|610
5MRE|1|aa|U|611
5MRE|1|aa|A|612
5MRE|1|aa|G|613
*
5MRE|1|aa|C|659
5MRE|1|aa|G|660
5MRE|1|aa|A|661
5MRE|1|aa|G|662

Current chains

Chain aa

15S ribosomal RNA

Nearby chains

Chain 66

mS45

Chain DD

uS4m

Chain LL

uS12m