J5_5MRE_005

3D structure

PDB id

5MRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.75 Å

Loop

Sequence

CGAA*UGUAAAC*GU*AU*ACAG

Length

19 nucleotides

Bulged bases

5MRE|1|aa|A|67, 5MRE|1|aa|A|109, 5MRE|1|aa|C|356, 5MRE|1|aa|A|357

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MRE|1|aa|C|65
5MRE|1|aa|G|66
5MRE|1|aa|A|67
5MRE|1|aa|A|68
*
5MRE|1|aa|U|106
5MRE|1|aa|G|107
5MRE|1|aa|U|108
5MRE|1|aa|A|109
5MRE|1|aa|A|110
5MRE|1|aa|A|111
5MRE|1|aa|C|112
*
5MRE|1|aa|G|321
5MRE|1|aa|U|322
*
5MRE|1|aa|A|342
5MRE|1|aa|U|343
*
5MRE|1|aa|A|355
5MRE|1|aa|C|356
5MRE|1|aa|A|357
5MRE|1|aa|G|358

Current chains

Chain aa

15S ribosomal RNA

Nearby chains

Chain 22

mS41

Chain I

uL14m

Chain M

bL19m

Chain PP

bS16m