J5_5MRF_004

3D structure

PDB id

5MRF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast mitochondrial ribosome - Class C

Experimental method

ELECTRON MICROSCOPY

Resolution

4.97 Å

Loop

Sequence

CUAA*UAG*CAUAAA*UUUAAUAG*CGAG

Length

25 nucleotides

Bulged bases

5MRF|1|aa|U|611

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MRF|1|aa|C|43
5MRF|1|aa|U|44
5MRF|1|aa|A|45
5MRF|1|aa|A|46
*
5MRF|1|aa|U|407
5MRF|1|aa|A|408
5MRF|1|aa|G|409
*
5MRF|1|aa|C|508
5MRF|1|aa|A|509
5MRF|1|aa|U|510
5MRF|1|aa|A|511
5MRF|1|aa|A|512
5MRF|1|aa|A|513
*
5MRF|1|aa|U|606
5MRF|1|aa|U|607
5MRF|1|aa|U|608
5MRF|1|aa|A|609
5MRF|1|aa|A|610
5MRF|1|aa|U|611
5MRF|1|aa|A|612
5MRF|1|aa|G|613
*
5MRF|1|aa|C|659
5MRF|1|aa|G|660
5MRF|1|aa|A|661
5MRF|1|aa|G|662

Current chains

Chain aa

15S ribosomal RNA

Nearby chains

Chain 66

mS45

Chain DD

uS4m

Chain LL

uS12m