J5_5OMW_001
3D structure
- PDB id
- 5OMW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mutant T252A of E. coli leucyl-tRNA synthetase, tRNA(leu) and leucyl-adenylate analogue in the aminoacylation conformation
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- AUGG*CAA*UCG*UGUG*CU
- Length
- 16 nucleotides
- Bulged bases
- 5OMW|1|B|U|8, 5OMW|1|B|G|9, 5OMW|1|B|U|48
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_5OMW_001 not in the Motif Atlas
- Homologous match to J5_3ZGZ_001
- Geometric discrepancy: 0.1005
- The information below is about J5_3ZGZ_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_97113.1
- Basepair signature
- cWW-cWW-cWW-cWW-F-cWW-cWW
- Number of instances in this motif group
- 4
Unit IDs
5OMW|1|B|A|7
5OMW|1|B|U|8
5OMW|1|B|G|9
5OMW|1|B|G|10
*
5OMW|1|B|C|25
5OMW|1|B|A|26
5OMW|1|B|A|27
*
5OMW|1|B|U|43
5OMW|1|B|C|44
5OMW|1|B|G|45
*
5OMW|1|B|U|47|||I
5OMW|1|B|G|47|||J
5OMW|1|B|U|48
5OMW|1|B|G|49
*
5OMW|1|B|C|65
5OMW|1|B|U|66
Current chains
- Chain B
- L-leucyl-tRNA
Nearby chains
- Chain A
- Leucine--tRNA ligase
Coloring options: