J5_5T7V_003

3D structure

PDB id

5T7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CCAAAC*GGGUUGUAG*CUGAGUAC*GGAAUCUGG*CUAAG

Length

37 nucleotides

Bulged bases

5T7V|1|B|U|301, 5T7V|1|B|U|451

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5T7V|1|B|C|271
5T7V|1|B|C|272
5T7V|1|B|A|273
5T7V|1|B|A|274
5T7V|1|B|A|275
5T7V|1|B|C|276
*
5T7V|1|B|G|295
5T7V|1|B|G|296
5T7V|1|B|G|297
5T7V|1|B|U|298
5T7V|1|B|U|299
5T7V|1|B|G|300
5T7V|1|B|U|301
5T7V|1|B|A|302
5T7V|1|B|G|303
*
5T7V|1|B|C|414
5T7V|1|B|U|415
5T7V|1|B|G|416
5T7V|1|B|A|417
5T7V|1|B|G|418
5T7V|1|B|U|419
5T7V|1|B|A|420
5T7V|1|B|C|421
*
5T7V|1|B|G|445
5T7V|1|B|G|446
5T7V|1|B|A|447
5T7V|1|B|A|448
5T7V|1|B|U|449
5T7V|1|B|C|450
5T7V|1|B|U|451
5T7V|1|B|G|452
5T7V|1|B|G|453
*
5T7V|1|B|C|466
5T7V|1|B|U|467
5T7V|1|B|A|468
5T7V|1|B|A|469
5T7V|1|B|G|470

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain LA

50S ribosomal protein L28