J5_5T7V_005
3D structure
- PDB id
- 5T7V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGAGUU*AGAC*GUUC*GC*GAGAAUG
- Length
- 23 nucleotides
- Bulged bases
- 5T7V|1|B|U|1293
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_5T7V_005 not in the Motif Atlas
- Homologous match to J5_4WF9_004
- Geometric discrepancy: 0.1029
- The information below is about J5_4WF9_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_74302.5
- Basepair signature
- cWW-tSH-tSS-tHW-F-cHS-F-tWS-cWW-cWW-F-cWW-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
5T7V|1|B|C|627
5T7V|1|B|G|628
5T7V|1|B|A|629
5T7V|1|B|G|630
5T7V|1|B|U|631
5T7V|1|B|U|632
*
5T7V|1|B|A|713
5T7V|1|B|G|714
5T7V|1|B|A|715
5T7V|1|B|C|716
*
5T7V|1|B|G|854
5T7V|1|B|U|855
5T7V|1|B|U|856
5T7V|1|B|C|857
*
5T7V|1|B|G|1234
5T7V|1|B|C|1235
*
5T7V|1|B|G|1288
5T7V|1|B|A|1289
5T7V|1|B|G|1290
5T7V|1|B|A|1291
5T7V|1|B|A|1292
5T7V|1|B|U|1293
5T7V|1|B|G|1294
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain L3
- 50S ribosomal protein L20
- Chain L4
- 50S ribosomal protein L21
- Chain LH
- 50S ribosomal protein L35
- Chain LJ
- 50S ribosomal protein L4
- Chain LO
- 50S ribosomal protein L15
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