J5_5T7V_008
3D structure
- PDB id
- 5T7V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUUUAC*GUUUG*CG*CG*CGGAUAAAAG
- Length
- 25 nucleotides
- Bulged bases
- 5T7V|1|B|U|2103, 5T7V|1|B|G|2455, 5T7V|1|B|G|2456, 5T7V|1|B|A|2457, 5T7V|1|B|U|2458
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5T7V|1|B|C|2100
5T7V|1|B|U|2101
5T7V|1|B|U|2102
5T7V|1|B|U|2103
5T7V|1|B|A|2104
5T7V|1|B|C|2105
*
5T7V|1|B|G|2269
5T7V|1|B|U|2270
5T7V|1|B|U|2271
5T7V|1|B|U|2272
5T7V|1|B|G|2273
*
5T7V|1|B|C|2285
5T7V|1|B|G|2286
*
5T7V|1|B|C|2308
5T7V|1|B|G|2309
*
5T7V|1|B|C|2454
5T7V|1|B|G|2455
5T7V|1|B|G|2456
5T7V|1|B|A|2457
5T7V|1|B|U|2458
5T7V|1|B|A|2459
5T7V|1|B|A|2460
5T7V|1|B|A|2461
5T7V|1|B|A|2462
5T7V|1|B|G|2463
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain D
- Transfer RNA; tRNA
- Chain L2
- 50S ribosomal protein L2
- Chain L9
- 50S ribosomal protein L27
- Chain LA
- 50S ribosomal protein L28
- Chain LH
- 50S ribosomal protein L35
- Chain LO
- 50S ribosomal protein L15
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